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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
ChIP-seq
8
ATAC-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
131
DNA binding
8
DNA accessibility
3
Transcription
Target of assay
100
histone
100
histone modification
65
broad histone mark
35
narrow histone mark
26
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
399
May, 2021
396
November, 2017
372
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
93
December, 2017
85
November, 2018
80
April, 2019
76
October, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
135
bam
111
bigWig
106
bed narrowPeak
100
bigBed narrowPeak
17
fastq
10
tagAlign
3
tsv
2
bed broadPeak
1
bedpe bed3+
Organism
143
Homo sapiens
Biosample type
134
tissue
8
primary cell
1
in vitro differentiated cells
Organ
50
blood vessel
50
vasculature
40
brain
21
heart
10
pancreas
8
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
2
adipose tissue
2
connective tissue
1
spleen
Project
143
AMP
Genome assembly (visualization)
110
GRCh38
110
hg19
Lab
142
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
3
inconsistent ontology term
Audit category:
missing controlled_by
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
143 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
pCHi-C
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 11 more…
primary cell
kidney epithelial cell
5
pancreatic alpha cell
2
pancreatic acinar cell
1
in vitro differentiated cells
white fat cell
1
See all biosamples
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