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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
157
DNase-seq
123
ChIP-seq
3
single cell RNA-seq
1
pCHi-C
Assay category
157
DNA accessibility
123
DNA binding
3
Transcription
Target of assay
86
histone
86
histone modification
51
broad histone mark
35
narrow histone mark
28
control
9
RNA binding protein
9
transcription factor
Date released
715
February, 2021
411
August, 2017
399
May, 2021
341
May, 2020
319
August, 2021
315
November, 2017
228
October, 2019
204
February, 2023
200
May, 2022
188
June, 2019
168
July, 2018
94
December, 2017
92
May, 2019
90
July, 2019
86
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
13
February, 2020
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
7
October, 2017
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
283
bam
255
bigWig
252
bed narrowPeak
252
bigBed narrowPeak
157
bed bed3+
157
bed broadPeak
157
bigBed broadPeak
4
fastq
3
tsv
1
bedpe bed3+
Organism
284
Homo sapiens
Biosample type
225
tissue
58
primary cell
1
in vitro differentiated cells
Organ
86
kidney
brain
57
vasculature
56
heart
55
blood vessel
50
musculature of body
39
limb
28
epithelium
19
connective tissue
18
ureter
9
pancreas
7
artery
7
eye
2
adipose tissue
2
liver
Project
284
AMP
Genome assembly (visualization)
254
GRCh38
242
hg19
Lab
284
AMP-T2D consortium
Audit category:
29
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
284 results
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Clear Filters
DNase-seq
ChIP-seq
single cell RNA-seq
pCHi-C
tissue
muscle of leg
13
7
heart
18
ascending aorta
1
16
muscle of arm
17
thoracic aorta
16
+ See 25 more…
primary cell
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
kidney epithelial cell
1
5
cardiac muscle cell
1
3
+ See 14 more…
in vitro differentiated cells
white fat cell
1
See all biosamples
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