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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
199
ChIP-seq
Assay category
199
DNA binding
Target of assay
113
histone
113
histone modification
68
broad histone mark
47
transcription factor
45
narrow histone mark
39
control
9
RNA binding protein
3
chromatin remodeller
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
314
August, 2021
306
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
214
bam
169
bed narrowPeak
169
bigWig
147
bigBed narrowPeak
94
fastq
bed bed3+
Organism
199
Homo sapiens
Biosample type
163
tissue
31
in vitro differentiated cells
5
primary cell
Organ
63
liver
50
blood vessel
50
vasculature
28
brain
24
epithelium
21
heart
10
embryo
7
limb
7
musculature of body
5
artery
5
kidney
2
pancreas
Project
199
AMP
Genome assembly (visualization)
159
hg19
158
GRCh38
Lab
199
AMP-T2D consortium
Audit category:
27
inconsistent control
7
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
199 results
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Clear Filters
ChIP-seq
tissue
liver
38
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 8 more…
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
6
Hepatic endoderm
4
Posterior foregut
2
definitive endodermal cell
2
+ See 1 more…
primary cell
kidney epithelial cell
5
See all biosamples
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