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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
187
DNase-seq
151
ChIP-seq
116
total RNA-seq
48
single cell RNA-seq
Assay category
187
DNA accessibility
164
Transcription
151
DNA binding
Target of assay
111
histone
111
histone modification
66
broad histone mark
45
narrow histone mark
31
control
9
RNA binding protein
9
transcription factor
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
502
bam
471
bigWig
307
bed narrowPeak
307
bigBed narrowPeak
187
bed bed3+
187
bed broadPeak
187
bigBed broadPeak
164
tsv
50
fastq
Organism
502
Homo sapiens
Biosample type
394
tissue
108
primary cell
Organ
159
pancreas
86
kidney
58
brain
58
epithelium
57
vasculature
56
heart
55
blood vessel
50
musculature of body
39
limb
20
connective tissue
18
ureter
7
artery
7
eye
2
liver
1
adipose tissue
Project
502
AMP
Genome assembly (visualization)
470
GRCh38
448
hg19
Lab
502
AMP-T2D consortium
Audit category:
35
inconsistent ontology term
BIOSAMPLE
ASSAY
502 results
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Clear Filters
DNase-seq
ChIP-seq
total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
116
muscle of leg
13
7
heart
18
ascending aorta
1
16
muscle of arm
17
+ See 41 more…
primary cell
pancreatic beta cell
9
cardiac fibroblast
3
5
skeletal muscle satellite cell
8
mesenchymal stem cell
7
pancreatic alpha cell
7
+ See 32 more…
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