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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
125
total RNA-seq
120
ChIP-seq
51
single cell RNA-seq
2
RNA microarray
Assay category
176
Transcription
120
DNA binding
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
289
bam
266
bigWig
173
tsv
97
bed narrowPeak
97
bigBed narrowPeak
50
fastq
Organism
298
Homo sapiens
Biosample type
238
tissue
58
primary cell
2
in vitro differentiated cells
Organ
159
pancreas
50
blood vessel
50
vasculature
44
epithelium
28
brain
21
heart
8
kidney
7
limb
7
musculature of body
5
artery
5
liver
2
connective tissue
Project
298
AMP
Genome assembly (visualization)
266
hg19
265
GRCh38
Lab
298
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
4
audit script error
BIOSAMPLE
ASSAY
298 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
RNA microarray
tissue
islet of Langerhans
120
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 10 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
hepatocyte
5
kidney epithelial cell
5
pancreatic acinar cell
5
+ See 12 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
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