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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
50
ChIP-seq
5
total RNA-seq
2
ATAC-seq
2
Hi-C
2
WGBS
Assay category
50
DNA binding
5
Transcription
2
3D chromatin structure
2
DNA accessibility
2
DNA methylation
Target of assay
36
histone
36
histone modification
22
broad histone mark
14
narrow histone mark
11
control
3
RNA binding protein
3
transcription factor
Date released
66
February, 2021
50
May, 2019
47
October, 2019
35
February, 2023
11
July, 2019
6
August, 2021
5
June, 2019
4
March, 2020
3
February, 2020
3
November, 2017
Available data
59
bam
49
bigWig
41
bed narrowPeak
39
bigBed narrowPeak
5
tsv
2
bed bed3+
2
hdf5
1
bed bedMethyl
1
bigBed bedMethyl
Organism
61
Homo sapiens
Biosample type
57
tissue
4
primary cell
Organ
62
vasculature
61
blood vessel
46
brain
46
heart
18
connective tissue
18
epithelium
17
musculature of body
16
kidney
12
adipose tissue
12
limb
10
liver
8
artery
8
pancreas
2
pericardium
1
eye
Project
61
AMP
Genome assembly (visualization)
48
hg19
47
GRCh38
Lab
61
AMP-T2D consortium
BIOSAMPLE
ASSAY
61 results
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ChIP-seq
total RNA-seq
ATAC-seq
Hi-C
WGBS
tissue
thoracic aorta
16
2
1
ascending aorta
16
1
aorta
13
2
coronary artery
5
1
primary cell
brain microvascular endothelial cell
1
endothelial cell of coronary artery
1
endothelial cell of hepatic sinusoid
1
smooth muscle cell of the coronary artery
1
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