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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
526
ChIP-seq
Assay category
526
DNA binding
Target of assay
249
transcription factor
180
histone
180
histone modification
108
broad histone mark
94
control
72
narrow histone mark
66
recombinant protein
42
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
512
bam
431
bigWig
410
bed narrowPeak
409
bigBed narrowPeak
324
fastq
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
526
Homo sapiens
Biosample type
315
cell line
197
tissue
14
primary cell
Organ
315
liver
119
brain
56
vasculature
53
blood vessel
21
heart
11
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
2
pancreas
Project
526
AMP
Genome assembly (visualization)
378
hg19
376
GRCh38
Lab
526
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
526 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
ascending aorta
16
thoracic aorta
16
caudate nucleus
15
substantia nigra
15
+ See 12 more…
primary cell
kidney epithelial cell
5
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
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