Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
128
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
128
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
99
histone
99
histone modification
62
broad histone mark
37
narrow histone mark
24
control
5
RNA binding protein
5
transcription factor
Date released
707
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
284
October, 2019
205
February, 2023
200
May, 2022
189
August, 2021
168
July, 2018
137
June, 2019
115
May, 2019
97
July, 2019
94
December, 2017
88
November, 2018
76
October, 2018
73
September, 2018
62
March, 2020
61
November, 2019
59
September, 2020
57
April, 2019
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
7
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
174
bam
130
bed narrowPeak
124
bigWig
93
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
176
Homo sapiens
Biosample type
155
tissue
16
cell line
5
in vitro differentiated cells
Organ
57
pancreas
50
blood vessel
50
vasculature
28
brain
21
epithelium
21
heart
7
limb
7
musculature of body
5
artery
kidney
1
adipose tissue
1
connective tissue
Project
176
AMP
Genome assembly (visualization)
152
hg19
149
GRCh38
Lab
176
AMP-T2D consortium
Audit category:
22
inconsistent ontology term
organ_slims!
kidney
BIOSAMPLE
ASSAY
176 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 8 more…
cell line
EndoC_BH1
13
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
See all biosamples
Download