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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
8
ATAC-seq
Assay category
99
DNA binding
8
DNA accessibility
Target of assay
104
histone
104
histone modification
68
broad histone mark
narrow histone mark
26
control
5
RNA binding protein
5
transcription factor
Date released
715
February, 2021
368
November, 2017
335
May, 2021
323
August, 2017
314
May, 2020
308
August, 2021
207
June, 2019
205
February, 2023
200
May, 2022
173
October, 2019
168
July, 2018
108
July, 2019
88
November, 2018
86
May, 2019
78
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
21
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
100
bam
76
bigWig
74
bed narrowPeak
68
bigBed narrowPeak
16
fastq
12
tagAlign
3
bed broadPeak
Organism
107
Homo sapiens
Biosample type
103
tissue
4
primary cell
Organ
36
blood vessel
36
vasculature
32
brain
15
heart
6
pancreas
5
limb
5
musculature of body
4
epithelium
4
kidney
3
artery
1
adipose tissue
1
connective tissue
1
spleen
Project
107
AMP
Genome assembly (visualization)
76
GRCh38
75
hg19
Lab
106
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
2
inconsistent ontology term
Audit category:
3
missing controlled_by
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
107 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
brain
13
ascending aorta
12
thoracic aorta
12
germinal matrix
10
temporal lobe
10
+ See 11 more…
primary cell
kidney epithelial cell
4
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