Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
112
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
112
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
89
histone
89
histone modification
57
broad histone mark
32
narrow histone mark
19
control
4
RNA binding protein
4
transcription factor
Date released
649
February, 2021
411
August, 2017
406
November, 2017
396
May, 2021
341
May, 2020
306
October, 2019
227
August, 2021
200
May, 2022
183
June, 2019
169
February, 2023
168
July, 2018
99
May, 2019
94
December, 2017
88
November, 2018
83
July, 2019
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
158
bam
119
bed narrowPeak
113
bigWig
82
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
160
Homo sapiens
Biosample type
134
tissue
16
cell line
5
in vitro differentiated cells
5
primary cell
Organ
57
pancreas
50
blood vessel
50
vasculature
28
brain
21
epithelium
heart
7
limb
7
musculature of body
5
artery
5
kidney
1
adipose tissue
1
connective tissue
Project
160
AMP
Genome assembly (visualization)
141
hg19
138
GRCh38
Lab
160
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
160 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 5 more…
cell line
EndoC_BH1
13
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
kidney epithelial cell
5
See all biosamples
Download