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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ChIP-seq
10
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
99
DNA binding
4
Transcription
1
DNA accessibility
Target of assay
79
histone
79
histone modification
51
broad histone mark
28
narrow histone mark
22
control
5
nucleotide modification
3
RNA binding protein
3
transcription factor
Date released
647
February, 2021
406
November, 2017
394
May, 2021
378
August, 2017
341
May, 2020
298
October, 2019
222
August, 2021
199
May, 2022
168
July, 2018
165
February, 2023
99
May, 2019
79
December, 2017
79
July, 2019
79
November, 2018
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
26
June, 2019
23
April, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
105
bam
87
bigWig
84
bed narrowPeak
83
bigBed narrowPeak
4
tsv
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
114
Homo sapiens
Biosample type
98
tissue
10
primary cell
6
cell line
Organ
50
blood vessel
50
vasculature
28
brain
heart
12
pancreas
11
epithelium
7
limb
7
musculature of body
5
artery
5
connective tissue
5
kidney
Project
114
AMP
Genome assembly (visualization)
87
hg19
86
GRCh38
Lab
104
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
9
inconsistent ontology term
organ_slims!
heart
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
114 results
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Clear Filters
ChIP-seq
MeRIP-seq
total RNA-seq
ATAC-seq
tissue
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
aorta
13
+ See 4 more…
primary cell
kidney epithelial cell
5
osteoblast
4
1
cell line
EndoC_BH1
6
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