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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
524
ChIP-seq
Assay category
524
DNA binding
Target of assay
249
transcription factor
179
histone
179
histone modification
108
broad histone mark
93
control
71
narrow histone mark
66
recombinant protein
42
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
683
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
149
February, 2023
118
May, 2019
102
July, 2019
96
May, 2022
94
December, 2017
81
November, 2018
80
April, 2019
50
March, 2020
47
September, 2023
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
510
bam
430
bigWig
409
bed narrowPeak
408
bigBed narrowPeak
324
fastq
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
524
Homo sapiens
Biosample type
315
cell line
195
tissue
14
primary cell
Organ
315
liver
119
brain
56
vasculature
53
blood vessel
21
heart
11
epithelium
7
limb
7
musculature of body
5
artery
5
kidney
pancreas
Project
524
AMP
Genome assembly (visualization)
377
hg19
375
GRCh38
Lab
524
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
10
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
524 results
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Clear Filters
ChIP-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
ascending aorta
16
thoracic aorta
16
caudate nucleus
15
substantia nigra
15
+ See 11 more…
primary cell
kidney epithelial cell
5
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
See all biosamples
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