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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
83
ChIP-seq
26
ATAC-seq
20
total RNA-seq
2
Hi-C
Assay category
83
DNA binding
26
DNA accessibility
20
Transcription
2
3D chromatin structure
Target of assay
66
histone
66
histone modification
42
broad histone mark
24
narrow histone mark
14
control
3
RNA binding protein
3
transcription factor
Date released
649
February, 2021
411
August, 2017
400
November, 2017
399
May, 2021
341
May, 2020
313
August, 2021
267
October, 2019
211
June, 2019
200
May, 2022
170
February, 2023
168
July, 2018
96
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
70
May, 2019
61
November, 2019
60
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
129
bam
95
bed narrowPeak
89
bigWig
58
bigBed narrowPeak
20
tsv
2
bedpe bed3+
2
hic
Organism
131
Homo sapiens
Biosample type
105
tissue
16
cell line
5
in vitro differentiated cells
5
primary cell
Organ
57
pancreas
50
blood vessel
vasculature
28
brain
21
epithelium
21
heart
7
limb
7
musculature of body
5
artery
5
kidney
1
adipose tissue
1
connective tissue
Project
131
AMP
Genome assembly (visualization)
117
hg19
114
GRCh38
Lab
131
AMP-T2D consortium
Audit category:
25
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
131 results
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Clear Filters
ChIP-seq
ATAC-seq
total RNA-seq
Hi-C
tissue
islet of Langerhans
19
19
1
temporal lobe
15
angular gyrus
13
germinal matrix
12
right atrium auricular region
10
+ See 4 more…
cell line
EndoC_BH1
13
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
primary cell
kidney epithelial cell
5
See all biosamples
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