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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
100
ATAC-seq
16
snATAC-seq
1
pCHi-C
Assay category
190
Transcription
116
DNA accessibility
DNA binding
Date released
707
February, 2021
291
May, 2020
276
August, 2021
234
May, 2021
205
February, 2023
200
May, 2022
187
June, 2019
168
July, 2018
115
August, 2017
108
July, 2019
72
October, 2019
61
March, 2020
59
September, 2020
49
April, 2018
48
November, 2019
47
September, 2023
41
September, 2018
25
February, 2020
19
April, 2020
18
November, 2018
16
January, 2021
16
November, 2020
15
February, 2018
15
May, 2023
10
December, 2019
8
January, 2018
8
October, 2017
7
August, 2020
5
January, 2019
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
2
October, 2018
1
August, 2022
1
December, 2018
Available data
233
bam
233
bigWig
189
tsv
Organism
307
Homo sapiens
Biosample type
155
primary cell
151
tissue
1
cell line
Organ
144
liver
8
blood
8
bodily fluid
8
pancreas
Project
246
AMP
61
T1D
Genome assembly (visualization)
233
hg19
188
GRCh38
Lab
246
AMP-T2D consortium
61
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
307 results
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Clear Filters
total RNA-seq
ATAC-seq
snATAC-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
peripheral blood mononuclear cell
8
B cell
2
2
+ See 25 more…
tissue
liver
143
islet of Langerhans
4
pancreas
4
cell line
HepG2
1
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