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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
total RNA-seq
16
ChIP-seq
10
ATAC-seq
Assay category
60
Transcription
16
DNA binding
10
DNA accessibility
Target of assay
16
histone
16
histone modification
9
narrow histone mark
7
broad histone mark
Date released
238
May, 2021
223
November, 2017
116
February, 2021
91
August, 2017
72
September, 2018
57
November, 2018
48
July, 2018
47
June, 2019
46
October, 2019
45
May, 2020
43
April, 2018
41
August, 2021
41
December, 2017
31
February, 2018
27
December, 2018
20
January, 2019
18
July, 2019
18
November, 2019
7
August, 2020
7
March, 2020
6
November, 2020
5
December, 2019
5
September, 2017
4
May, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
October, 2018
1
March, 2023
Available data
86
bam
76
bigWig
60
tsv
26
bed narrowPeak
16
tagAlign
3
bed bed3+
Organism
86
Homo sapiens
Biosample type
tissue
48
primary cell
30
in vitro differentiated cells
8
cell line
Organ
8
embryo
3
epithelium
3
liver
Project
45
T1D
41
AMP
Genome assembly (visualization)
149
hg19
86
GRCh38
Lab
45
Kyle Gaulton, UCSD
41
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
86 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
hepatocyte
3
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
+ See 21 more…
in vitro differentiated cells
neural progenitor cell
7
13
10
cell line
H1-hESC
8
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