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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
74
ATAC-seq
60
total RNA-seq
13
ChIP-seq
Assay category
74
DNA accessibility
60
Transcription
13
DNA binding
Target of assay
13
histone
13
histone modification
7
narrow histone mark
6
broad histone mark
Date released
567
February, 2021
276
May, 2021
230
August, 2017
208
June, 2019
200
October, 2019
164
July, 2018
102
August, 2021
96
May, 2019
72
July, 2019
72
September, 2018
64
April, 2019
63
November, 2017
57
November, 2019
49
April, 2018
47
October, 2018
45
May, 2020
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
27
December, 2017
27
November, 2018
21
January, 2019
15
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
87
bed narrowPeak
83
bam
73
bigWig
64
xls
60
tsv
13
tagAlign
Organism
147
Homo sapiens
Biosample type
64
tissue
45
primary cell
30
in vitro differentiated cells
8
cell line
Organ
liver
64
kidney
8
embryo
3
epithelium
Project
102
AMP
45
T1D
Genome assembly (visualization)
147
GRCh38
132
hg19
Lab
64
Katalin Susztak, Upenn
45
Kyle Gaulton, UCSD
38
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
liver
BIOSAMPLE
ASSAY
147 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
tissue
kidney
64
primary cell
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
T-helper 1 cell
2
T-helper 17 cell
2
+ See 20 more…
in vitro differentiated cells
neural progenitor cell
10
7
13
cell line
H1-hESC
8
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