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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
100
ATAC-seq
31
ChIP-seq
10
snATAC-seq
9
single cell RNA-seq
2
total RNA-seq
1
pCHi-C
Assay category
110
DNA accessibility
31
DNA binding
11
Transcription
Target of assay
23
control
8
histone
8
histone modification
8
narrow histone mark
Date released
214
August, 2021
200
May, 2022
162
August, 2017
147
February, 2021
147
February, 2023
134
May, 2020
126
November, 2017
107
October, 2019
106
May, 2021
56
September, 2020
47
September, 2023
46
March, 2020
29
July, 2019
29
October, 2018
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
10
November, 2020
9
November, 2018
9
October, 2017
8
February, 2018
8
January, 2018
8
June, 2019
5
December, 2018
5
December, 2019
4
January, 2019
4
July, 2018
4
March, 2023
4
November, 2019
4
October, 2022
4
September, 2017
3
March, 2019
3
May, 2023
1
August, 2018
1
August, 2022
1
September, 2018
Available data
76
bam
53
bigWig
31
tagAlign
8
bed narrowPeak
1
tsv
Organism
152
Homo sapiens
Biosample type
102
primary cell
50
tissue
1
cell line
Organ
32
liver
19
lung
Project
134
AMP
19
LungMap
Genome assembly (visualization)
215
hg19
GRCh38
Lab
134
AMP-T2D consortium
19
Xin Sun, UCSD
Audit category:
4
inconsistent ontology term
award.project!
T1D
assembly!
GRCh38
BIOSAMPLE
ASSAY
153 results
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Clear Filters
ATAC-seq
ChIP-seq
snATAC-seq
single cell RNA-seq
total RNA-seq
pCHi-C
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
tissue
liver
31
lung
10
9
cell line
HepG2
1
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