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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
total RNA-seq
100
ATAC-seq
82
ChIP-seq
1
Hi-C
1
pCHi-C
Assay category
145
Transcription
100
DNA accessibility
82
DNA binding
1
3D chromatin structure
Target of assay
28
transcription factor
27
control
27
histone
27
histone modification
27
narrow histone mark
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
403
August, 2017
369
November, 2017
318
August, 2021
314
October, 2019
296
May, 2020
241
May, 2021
214
June, 2019
200
May, 2022
182
February, 2023
168
July, 2018
115
May, 2019
108
July, 2019
90
December, 2017
76
April, 2019
73
September, 2018
67
November, 2018
65
October, 2018
60
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
39
February, 2018
35
May, 2024
33
December, 2018
25
February, 2020
24
January, 2019
23
October, 2017
19
April, 2020
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
270
bam
243
bigWig
144
tsv
55
bed narrowPeak
50
tagAlign
33
fastq
28
bigBed narrowPeak
Organism
329
Homo sapiens
Biosample type
200
tissue
102
primary cell
27
cell line
Organ
195
liver
25
blood
25
bodily fluid
7
spleen
Project
329
AMP
T1D
Genome assembly (visualization)
243
hg19
190
GRCh38
Lab
329
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
1
inconsistent control
award.project!
T1D
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
329 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
Hi-C
pCHi-C
tissue
liver
143
50
spleen
7
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
cell line
GM12878
25
HepG2
1
1
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