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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
150
total RNA-seq
100
ATAC-seq
41
ChIP-seq
1
pCHi-C
Assay category
150
Transcription
100
DNA accessibility
41
DNA binding
Target of assay
histone
34
histone modification
30
narrow histone mark
27
control
14
transcription factor
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
Date released
715
February, 2021
318
November, 2017
299
August, 2021
269
May, 2020
213
August, 2017
200
May, 2022
199
June, 2019
191
May, 2021
182
February, 2023
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
59
September, 2020
57
March, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
234
bam
207
bigWig
149
tsv
23
fastq
23
tagAlign
14
bed narrowPeak
14
bigBed narrowPeak
Organism
292
Homo sapiens
Biosample type
167
tissue
102
primary cell
23
cell line
Organ
172
liver
17
blood
17
bodily fluid
1
spleen
Project
292
AMP
T1D
Genome assembly (visualization)
207
hg19
162
GRCh38
Lab
292
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
award.project!
T1D
target.investigated_as!
histone
BIOSAMPLE
ASSAY
292 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
spleen
1
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
cell line
GM12878
17
HepG2
5
1
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