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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ATAC-seq
3
Hi-C
2
total RNA-seq
Assay category
55
DNA accessibility
3
3D chromatin structure
2
Transcription
Date released
234
August, 2021
199
February, 2023
176
May, 2022
142
February, 2021
129
August, 2017
106
May, 2021
63
October, 2019
59
September, 2020
57
May, 2020
47
September, 2023
42
March, 2020
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
13
November, 2017
8
October, 2017
7
August, 2020
7
January, 2018
5
December, 2019
4
July, 2018
4
March, 2019
4
November, 2020
3
March, 2023
3
October, 2022
1
April, 2019
1
August, 2018
1
August, 2022
1
November, 2018
1
November, 2019
1
September, 2018
Available data
bam
260
bigWig
188
tsv
50
tagAlign
27
bed narrowPeak
3
bedpe bed3+
3
cool
3
hic
Organism
60
Homo sapiens
Biosample type
60
primary cell
cell line
Organ
3
epithelium
3
pancreas
Project
57
AMP
3
HPAP
Genome assembly (visualization)
3
hg19
Lab
57
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
files.file_type!
bam
biosample_type!
cell line
BIOSAMPLE
ASSAY
60 results
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ATAC-seq
Hi-C
total RNA-seq
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
neutrophil
1
pancreatic acinar cell
1
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