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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
188
total RNA-seq
53
ATAC-seq
33
ChIP-seq
Assay category
188
Transcription
53
DNA accessibility
33
DNA binding
Target of assay
33
histone
33
histone modification
28
narrow histone mark
5
broad histone mark
Date released
551
February, 2021
334
November, 2017
303
May, 2021
272
August, 2017
260
May, 2020
210
June, 2019
207
October, 2019
164
July, 2018
97
May, 2019
85
July, 2019
80
November, 2018
72
December, 2017
72
September, 2018
65
April, 2019
49
April, 2018
47
August, 2021
47
October, 2018
31
February, 2018
31
November, 2019
30
December, 2018
26
January, 2019
20
March, 2020
20
May, 2022
14
October, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
November, 2020
5
September, 2017
3
August, 2018
3
February, 2023
3
June, 2018
3
September, 2020
Available data
298
bam
274
bigWig
189
tsv
64
tagAlign
39
bed narrowPeak
17
fastq
6
bigBed narrowPeak
4
bed broadPeak
Organism
274
Homo sapiens
Biosample type
184
tissue
90
primary cell
Organ
170
liver
7
brain
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
229
AMP
45
T1D
Genome assembly (visualization)
273
hg19
221
GRCh38
Lab
228
AMP-T2D consortium
45
Kyle Gaulton, UCSD
1
Stephen Parker, UMich
Audit category:
8
inconsistent ontology term
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
274 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
tissue
liver
143
27
brain
6
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
+ See 2 more…
primary cell
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
T-helper 17 cell
2
2
+ See 20 more…
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