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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
216
total RNA-seq
82
ChIP-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
217
Transcription
DNA accessibility
82
DNA binding
Target of assay
59
histone
59
histone modification
42
narrow histone mark
23
control
17
broad histone mark
Date released
666
February, 2021
406
November, 2017
400
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
94
December, 2017
80
April, 2019
November, 2018
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
296
bam
273
bigWig
215
tsv
59
bed narrowPeak
59
fastq
50
tagAlign
1
csv
Organism
300
Homo sapiens
Biosample type
193
tissue
106
primary cell
1
cell line
Organ
194
liver
58
pancreas
47
epithelium
Project
255
AMP
45
T1D
Genome assembly (visualization)
273
hg19
265
GRCh38
Lab
255
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
4
inconsistent ontology term
Audit category:
32
missing controlled_by
month_released!
November, 2018
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
300 results
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Clear Filters
total RNA-seq
ChIP-seq
pCHi-C
single cell RNA-seq
tissue
liver
143
50
primary cell
pancreatic ductal cell
4
13
pancreatic endocrine cell
11
pancreatic acinar cell
2
8
pancreatic alpha cell
10
pancreatic beta cell
10
+ See 28 more…
cell line
HepG2
1
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