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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
ChIP-seq
Assay category
190
Transcription
144
DNA binding
100
DNA accessibility
Target of assay
58
histone
58
histone modification
44
control
43
narrow histone mark
42
transcription factor
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
144
bam
99
bed narrowPeak
99
bigWig
94
fastq
50
bigBed narrowPeak
50
tagAlign
15
bed bed3+
Organism
144
Homo sapiens
Biosample type
98
tissue
43
in vitro differentiated cells
3
stem cell
Organ
113
liver
19
epithelium
13
embryo
Project
144
AMP
Genome assembly (visualization)
104
hg19
96
GRCh38
Lab
144
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
BIOSAMPLE
ASSAY
144 results
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ChIP-seq
tissue
liver
88
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
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stem cell
hESC
3
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