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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
144
ChIP-seq
143
total RNA-seq
1
pCHi-C
Assay category
144
DNA binding
143
Transcription
Target of assay
58
histone
58
histone modification
44
control
43
narrow histone mark
42
transcription factor
15
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
287
bam
242
bigWig
144
tsv
99
bed narrowPeak
94
fastq
50
bigBed narrowPeak
50
tagAlign
15
bed bed3+
Organism
288
Homo sapiens
Biosample type
241
tissue
primary cell
43
in vitro differentiated cells
3
stem cell
1
cell line
Organ
257
liver
19
epithelium
13
embryo
Project
288
AMP
Genome assembly (visualization)
247
hg19
239
GRCh38
Lab
288
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
11
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
288 results
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Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
tissue
liver
88
143
right lobe of liver
10
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
9
Posterior foregut
5
definitive endodermal cell
5
primitive gut cell
5
+ See 1 more…
stem cell
hESC
3
cell line
HepG2
1
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