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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
310
total RNA-seq
ATAC-seq
48
single cell RNA-seq
1
pCHi-C
Assay category
358
Transcription
Date released
685
February, 2021
328
November, 2017
321
August, 2017
275
May, 2021
243
October, 2019
219
August, 2021
218
June, 2019
191
May, 2020
168
July, 2018
123
May, 2022
120
May, 2019
102
February, 2023
102
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
30
January, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
November, 2020
10
December, 2019
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
August, 2022
1
March, 2019
1
October, 2017
Available data
402
bam
379
bigWig
353
tsv
50
fastq
tagAlign
27
bed narrowPeak
Organism
359
Homo sapiens
Biosample type
263
tissue
95
primary cell
1
cell line
Organ
157
pancreas
144
liver
33
epithelium
2
connective tissue
Project
314
AMP
45
T1D
Genome assembly (visualization)
352
GRCh38
352
hg19
Lab
314
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
assay_title!
ATAC-seq
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
359 results
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Clear Filters
total RNA-seq
single cell RNA-seq
pCHi-C
tissue
liver
143
islet of Langerhans
120
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 37 more…
cell line
HepG2
1
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