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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
304
total RNA-seq
83
ChIP-seq
48
single cell RNA-seq
Assay category
352
Transcription
83
DNA binding
Target of assay
78
histone
78
histone modification
41
narrow histone mark
37
broad histone mark
5
transcription factor
3
RNA binding protein
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
435
bam
435
bigWig
352
tsv
83
bed narrowPeak
64
bigBed narrowPeak
50
fastq
19
tagAlign
Organism
435
Homo sapiens
Biosample type
342
tissue
93
primary cell
Organ
162
liver
153
pancreas
46
heart
33
epithelium
18
kidney
2
connective tissue
Project
390
AMP
45
T1D
Genome assembly (visualization)
489
hg19
435
GRCh38
Lab
390
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
10
inconsistent ontology term
BIOSAMPLE
ASSAY
435 results
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Clear Filters
total RNA-seq
ChIP-seq
single cell RNA-seq
tissue
liver
143
19
islet of Langerhans
116
heart left ventricle
28
kidney
18
heart right ventricle
11
+ See 1 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
+ See 35 more…
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