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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
ChIP-seq
188
total RNA-seq
45
ATAC-seq
Assay category
204
DNA binding
188
Transcription
45
DNA accessibility
Target of assay
119
histone
119
histone modification
61
narrow histone mark
58
broad histone mark
50
control
33
transcription factor
7
RNA binding protein
2
chromatin remodeller
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
437
bam
387
bigWig
189
tsv
154
bed narrowPeak
127
bigBed narrowPeak
50
tagAlign
35
fastq
Organism
437
Homo sapiens
Biosample type
315
tissue
95
primary cell
27
cell line
Organ
193
liver
50
blood vessel
50
vasculature
28
brain
27
blood
27
bodily fluid
21
heart
7
limb
7
musculature of body
7
spleen
5
artery
5
epithelium
5
kidney
2
pancreas
Project
392
AMP
45
T1D
Genome assembly (visualization)
387
hg19
333
GRCh38
Lab
392
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
11
inconsistent ontology term
1
inconsistent control
BIOSAMPLE
ASSAY
437 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
tissue
liver
50
143
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 8 more…
primary cell
kidney epithelial cell
5
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
T follicular helper cell
2
2
T-helper 1 cell
2
2
+ See 21 more…
cell line
GM12878
27
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