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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
191
Transcription
135
DNA binding
118
DNA accessibility
7
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
63
bigWig
62
bam
18
fastq
16
bed narrowPeak
10
bed broadPeak
10
bigBed narrowPeak
9
bed bed3+
9
bigBed broadPeak
Organism
118
Homo sapiens
Biosample type
100
primary cell
18
tissue
Organ
8
pancreas
3
brain
3
liver
2
adipose tissue
2
connective tissue
2
spleen
Project
118
AMP
Genome assembly (visualization)
62
hg19
17
GRCh38
Lab
117
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
118 results
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ATAC-seq
DNase-seq
FAIRE-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 23 more…
tissue
body of pancreas
4
2
brain
2
liver
2
omental fat pad
1
1
spleen
1
1
+ See 4 more…
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