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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
120
ChIP-seq
100
ATAC-seq
9
DNase-seq
7
WGBS
1
FAIRE-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
120
DNA binding
Target of assay
64
transcription factor
29
control
27
histone
27
histone modification
27
narrow histone mark
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
406
November, 2017
296
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
94
December, 2017
80
April, 2019
74
October, 2018
70
November, 2018
50
May, 2020
43
August, 2021
40
May, 2024
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
120
bam
90
bed narrowPeak
90
bigWig
70
fastq
63
bigBed narrowPeak
50
tagAlign
Organism
120
Homo sapiens
Biosample type
60
cell line
60
tissue
Organ
99
liver
15
blood
15
bodily fluid
6
spleen
Project
120
AMP
Genome assembly (visualization)
88
hg19
82
GRCh38
Lab
120
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
120 results
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Clear Filters
ChIP-seq
cell line
HepG2
45
GM12878
15
tissue
liver
54
spleen
6
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