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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ATAC-seq
32
ChIP-seq
7
WGBS
2
total RNA-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
55
DNA accessibility
32
DNA binding
7
DNA methylation
3
Transcription
Target of assay
29
control
3
recombinant protein
3
transcription factor
Date released
259
August, 2021
161
May, 2022
160
February, 2023
141
February, 2021
135
August, 2017
125
November, 2017
97
October, 2019
83
May, 2021
81
May, 2020
59
September, 2020
47
September, 2023
32
March, 2020
31
June, 2019
29
October, 2018
25
February, 2020
23
May, 2019
19
April, 2020
17
December, 2017
17
July, 2019
17
November, 2018
16
January, 2021
15
April, 2019
14
May, 2023
10
November, 2020
10
October, 2017
8
February, 2018
7
August, 2020
5
December, 2018
5
December, 2019
5
January, 2018
5
March, 2023
4
January, 2019
4
July, 2018
4
September, 2017
2
March, 2019
2
November, 2019
1
August, 2018
1
August, 2022
1
October, 2022
1
September, 2018
Available data
39
bam
23
tagAlign
17
fastq
9
bigWig
7
bed bedMethyl
7
bigBed bedMethyl
2
bed narrowPeak
2
bigBed narrowPeak
1
csv
1
tsv
Organism
98
Homo sapiens
Biosample type
58
primary cell
32
tissue
8
cell line
Organ
28
liver
5
spleen
4
pancreas
3
blood
3
bodily fluid
Project
98
AMP
Genome assembly (visualization)
hg19
286
GRCh38
Lab
98
AMP-T2D consortium
Audit category:
1
missing controlled_by
assembly!
hg19
BIOSAMPLE
ASSAY
98 results
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Clear Filters
ATAC-seq
ChIP-seq
WGBS
total RNA-seq
pCHi-C
single cell RNA-seq
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
macrophage
11
neutrophil
1
pancreatic cell
1
tissue
liver
23
spleen
3
2
body of pancreas
2
pancreas
2
cell line
HepG2
3
1
1
GM12878
3
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