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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
1
WGBS
1
pCHi-C
Assay category
56
DNA binding
1
DNA methylation
Target of assay
53
transcription factor
20
RNA binding protein
16
recombinant protein
3
chromatin remodeller
3
control
Date released
311
November, 2017
96
February, 2021
57
November, 2018
44
August, 2021
30
October, 2019
28
December, 2018
23
January, 2019
21
May, 2021
16
November, 2019
11
March, 2020
6
February, 2023
6
November, 2020
2
March, 2023
1
January, 2018
1
May, 2020
1
October, 2022
Available data
57
bam
57
fastq
53
bigWig
52
bed narrowPeak
52
bigBed narrowPeak
1
bed bedMethyl
1
bigBed bedMethyl
1
tsv
Organism
58
Homo sapiens
Biosample type
219
tissue
148
primary cell
58
cell line
Organ
43
liver
15
blood
15
bodily fluid
Project
58
AMP
Genome assembly (visualization)
53
GRCh38
50
hg19
Lab
58
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
58 results
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ChIP-seq
WGBS
pCHi-C
cell line
HepG2
41
1
1
GM12878
15
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