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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
9
DNase-seq
1
FAIRE-seq
Assay category
59
DNA binding
10
DNA accessibility
Target of assay
59
transcription factor
20
RNA binding protein
15
recombinant protein
3
chromatin remodeller
3
other context
3
other post-translational modification
Date released
308
November, 2017
210
June, 2019
97
May, 2019
70
October, 2019
69
November, 2018
64
April, 2019
50
December, 2017
45
October, 2018
41
August, 2017
30
December, 2018
21
January, 2019
14
September, 2018
6
October, 2017
5
September, 2017
2
July, 2019
1
November, 2020
0
May, 2020
Available data
366
bam
336
bigWig
189
tsv
96
bed narrowPeak
84
fastq
69
bigBed narrowPeak
50
tagAlign
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
69
Homo sapiens
Biosample type
52
cell line
17
tissue
Organ
47
liver
12
blood
12
bodily fluid
4
spleen
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
69
AMP
Genome assembly (visualization)
68
GRCh38
67
hg19
Lab
69
AMP-T2D consortium
Audit category:
5
inconsistent control read length
inconsistent control run_type
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
69 results
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ChIP-seq
DNase-seq
FAIRE-seq
cell line
HepG2
40
GM12878
12
tissue
liver
4
2
spleen
3
1
body of pancreas
2
brain
2
omental fat pad
1
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