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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
105
ATAC-seq
29
ChIP-seq
1
pCHi-C
Assay category
190
Transcription
105
DNA accessibility
29
DNA binding
Target of assay
29
control
27
histone
histone modification
27
narrow histone mark
Date released
715
February, 2021
318
November, 2017
314
May, 2020
299
August, 2021
259
May, 2021
212
August, 2017
205
February, 2023
200
May, 2022
199
June, 2019
168
July, 2018
118
October, 2019
108
July, 2019
88
November, 2018
63
December, 2017
61
March, 2020
59
September, 2020
51
November, 2019
49
April, 2018
47
September, 2023
46
October, 2018
41
September, 2018
35
December, 2018
28
May, 2019
25
February, 2020
23
February, 2018
23
January, 2019
20
April, 2019
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
October, 2017
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
March, 2019
5
March, 2023
5
May, 2024
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
267
bam
238
bigWig
189
tsv
23
tagAlign
11
fastq
5
bed narrowPeak
5
bigBed narrowPeak
2
bed bed3+
Organism
325
Homo sapiens
Biosample type
172
tissue
152
primary cell
1
cell line
Organ
167
liver
11
pancreas
5
epithelium
Project
280
AMP
45
T1D
Genome assembly (visualization)
240
hg19
195
GRCh38
Lab
280
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
month_released!
March, 2019
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
325 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
liver
143
23
islet of Langerhans
6
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 27 more…
cell line
HepG2
1
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