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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
214
total RNA-seq
82
ChIP-seq
59
ATAC-seq
Assay category
214
Transcription
82
DNA binding
59
DNA accessibility
Target of assay
59
histone
59
histone modification
42
narrow histone mark
23
control
17
broad histone mark
Date released
572
February, 2021
392
November, 2017
283
May, 2020
282
August, 2017
277
May, 2021
250
October, 2019
218
June, 2019
164
July, 2018
120
May, 2019
94
December, 2017
87
November, 2018
82
July, 2019
79
April, 2019
76
October, 2018
72
September, 2018
59
November, 2019
49
April, 2018
49
August, 2021
39
February, 2018
34
December, 2018
30
January, 2019
24
May, 2022
16
March, 2020
15
October, 2017
11
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
1
March, 2019
Available data
355
bam
332
bigWig
215
tsv
73
bed narrowPeak
73
fastq
50
tagAlign
14
bigBed narrowPeak
1
csv
Organism
355
Homo sapiens
Biosample type
193
tissue
162
primary cell
Organ
193
liver
72
pancreas
61
epithelium
Project
310
AMP
45
T1D
Genome assembly (visualization)
332
hg19
279
GRCh38
Lab
310
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
Audit category:
32
missing controlled_by
BIOSAMPLE
ASSAY
355 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
tissue
liver
143
50
primary cell
pancreatic ductal cell
4
13
4
pancreatic beta cell
10
4
pancreatic acinar cell
2
8
3
pancreatic alpha cell
10
3
pancreatic endocrine cell
11
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