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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
ATAC-seq
40
single cell RNA-seq
23
ChIP-seq
18
total RNA-seq
1
pCHi-C
Assay category
58
Transcription
55
DNA accessibility
23
DNA binding
Target of assay
23
control
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
283
bam
bigWig
189
tsv
50
tagAlign
41
fastq
27
bed narrowPeak
19
zippedFastqFolder
Organism
137
Homo sapiens
Biosample type
113
primary cell
23
tissue
1
cell line
Organ
24
liver
16
epithelium
16
pancreas
Project
81
AMP
56
HPAP
Lab
81
AMP-T2D consortium
56
Klaus Kaestner, Upenn
files.file_type!
bigWig
BIOSAMPLE
ASSAY
137 results
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Clear Filters
ATAC-seq
single cell RNA-seq
ChIP-seq
total RNA-seq
pCHi-C
primary cell
Langerhans cell
40
naive thymus-derived CD4-positive, alpha-beta T cell
22
1
CD4-positive, alpha-beta memory T cell
22
pancreatic alpha cell
15
macrophage
11
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tissue
liver
23
cell line
HepG2
1
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