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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
173
total RNA-seq
13
ATAC-seq
Assay category
173
Transcription
DNA binding
13
DNA accessibility
Date released
563
February, 2021
188
May, 2020
187
June, 2019
186
May, 2021
164
July, 2018
98
August, 2017
89
August, 2021
79
July, 2019
49
April, 2018
46
November, 2019
40
September, 2018
35
February, 2023
31
October, 2019
16
November, 2018
15
February, 2018
13
March, 2020
12
May, 2023
8
October, 2017
7
August, 2020
6
November, 2020
5
December, 2019
5
January, 2019
5
September, 2017
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
2
October, 2018
1
March, 2023
Available data
186
bam
173
bigWig
173
tsv
13
bed narrowPeak
Organism
186
Homo sapiens
Biosample type
79
in vitro differentiated cells
65
primary cell
38
tissue
4
cell line
Organ
40
pancreas
6
epithelium
3
heart
2
embryo
1
connective tissue
Project
135
AMP
51
T1D
Genome assembly (visualization)
193
hg19
186
GRCh38
Lab
135
AMP-T2D consortium
51
Kyle Gaulton, UCSD
Audit category:
69
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
186 results
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total RNA-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
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primary cell
monocyte
51
13
embryonic stem cell
1
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
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