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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
total RNA-seq
16
ATAC-seq
1
pCHi-C
Assay category
69
Transcription
16
DNA accessibility
DNA binding
Date released
128
February, 2021
86
May, 2021
16
March, 2020
11
February, 2023
11
October, 2019
9
November, 2019
8
May, 2020
6
July, 2018
6
November, 2020
4
June, 2019
3
August, 2021
2
December, 2019
2
July, 2019
1
February, 2020
1
June, 2018
Available data
69
bam
69
bigWig
69
tsv
Organism
86
Homo sapiens
Biosample type
65
in vitro differentiated cells
20
cell line
1
primary cell
Organ
21
epithelium
20
pancreas
2
embryo
Project
85
AMP
1
T1D
Genome assembly (visualization)
69
GRCh38
69
hg19
Lab
85
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
86
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
86 results
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total RNA-seq
ATAC-seq
pCHi-C
in vitro differentiated cells
cardiomyocytes
59
cardiomyocytes (cardiac muscle cell)
1
intermediate cardiomyocytes
1
intermediate endothelial cell
1
intermediate smooth muscle cell
1
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cell line
EndoC_BH1
4
16
primary cell
naive B cel
1
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