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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
total RNA-seq
29
ATAC-seq
1
DNAme array
Assay category
123
Transcription
29
DNA accessibility
DNA binding
1
DNA methylation
Date released
662
February, 2021
246
May, 2020
187
June, 2019
168
July, 2018
153
May, 2021
126
August, 2021
115
August, 2017
108
July, 2019
103
February, 2023
72
October, 2019
61
March, 2020
49
April, 2018
48
November, 2019
41
September, 2018
25
February, 2020
18
November, 2018
15
February, 2018
10
December, 2019
8
January, 2018
7
October, 2017
6
November, 2020
January, 2019
5
September, 2017
4
August, 2018
3
June, 2018
2
May, 2022
2
October, 2018
1
August, 2022
1
December, 2018
1
May, 2023
1
October, 2022
Available data
135
bam
122
bigWig
122
tsv
13
bed narrowPeak
Organism
153
Homo sapiens
Biosample type
79
in vitro differentiated cells
38
tissue
20
cell line
16
primary cell
Organ
56
pancreas
22
epithelium
3
heart
2
embryo
1
connective tissue
Project
153
AMP
Genome assembly (visualization)
135
GRCh38
135
hg19
Lab
153
AMP-T2D consortium
81
Kyle Gaulton, UCSD
Audit category:
85
inconsistent ontology term
assay_slims!
DNA binding
month_released!
January, 2019
BIOSAMPLE
ASSAY
153 results
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total RNA-seq
ATAC-seq
DNAme array
in vitro differentiated cells
cardiomyocytes
59
induced pluripotent stem cell
9
cardiac fibroblast
1
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
+ See 8 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
cell line
EndoC_BH1
4
16
primary cell
monocyte
1
13
1
embryonic stem cell
1
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