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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ATAC-seq
5
DNase-seq
1
FAIRE-seq
Assay category
461
DNA binding
271
Transcription
45
DNA accessibility
16
DNA methylation
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
23
bam
23
bed narrowPeak
15
bigWig
10
bigBed narrowPeak
9
fastq
2
bed broadPeak
2
bigBed broadPeak
Organism
45
Homo sapiens
Biosample type
18
primary cell
16
cell line
6
in vitro differentiated cells
5
tissue
Organ
21
pancreas
19
epithelium
2
connective tissue
2
liver
1
adipose tissue
Project
45
AMP
Genome assembly (visualization)
28
hg19
20
GRCh38
Lab
40
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
16
inconsistent ontology term
BIOSAMPLE
ASSAY
45 results
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ATAC-seq
DNase-seq
FAIRE-seq
primary cell
monocyte
13
skeletal muscle myoblast
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
EndoC_BH1
16
in vitro differentiated cells
embryonic stem cell
5
adipocyte
1
tissue
islet of Langerhans
1
1
right lobe of liver
1
1
subcutaneous adipose tissue
1
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