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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
154
ChIP-seq
total RNA-seq
17
pCHi-C
5
ATAC-seq
Assay category
154
DNA binding
5
DNA accessibility
Target of assay
134
histone
134
histone modification
74
broad histone mark
60
narrow histone mark
12
transcription factor
8
control
5
RNA binding protein
Date released
176
May, 2021
18
February, 2023
18
May, 2022
16
January, 2021
Available data
122
bigWig
114
bed narrowPeak
84
bam
84
tagAlign
Organism
176
Homo sapiens
Biosample type
133
primary cell
42
in vitro differentiated cells
1
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
101
T1D
75
AMP
Genome assembly (visualization)
122
hg19
84
GRCh38
Lab
176
Kyle Gaulton, UCSD
41
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
176 results
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ChIP-seq
pCHi-C
ATAC-seq
primary cell
monocyte
84
1
CD8-positive, alpha-beta T cell
33
1
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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in vitro differentiated cells
embryonic stem cell
37
5
tissue
thymus
1
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