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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
17
pCHi-C
9
total RNA-seq
5
ATAC-seq
1
DNAme array
Assay category
75
DNA binding
9
Transcription
5
DNA accessibility
1
DNA methylation
Target of assay
54
histone
54
histone modification
32
broad histone mark
22
narrow histone mark
12
transcription factor
9
control
5
RNA binding protein
Date released
200
May, 2022
178
August, 2021
164
February, 2023
162
August, 2017
143
February, 2021
133
May, 2020
107
May, 2021
97
October, 2019
56
September, 2020
47
September, 2023
42
March, 2020
29
July, 2019
29
October, 2018
28
November, 2017
25
February, 2020
24
May, 2019
19
April, 2020
17
December, 2017
16
April, 2019
16
January, 2021
9
October, 2017
8
February, 2018
8
June, 2019
7
January, 2018
5
December, 2019
5
November, 2018
4
December, 2018
4
July, 2018
4
November, 2020
4
September, 2017
3
March, 2019
3
May, 2023
3
October, 2022
2
March, 2023
1
August, 2018
1
August, 2022
1
January, 2019
1
November, 2019
1
September, 2018
Available data
40
bigWig
30
bed narrowPeak
2
bed bed3+
1
bam
1
tagAlign
Organism
107
Homo sapiens
Biosample type
57
primary cell
48
in vitro differentiated cells
cell line
2
tissue
Organ
2
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
epithelium
1
thymus
Project
90
AMP
17
T1D
Genome assembly (visualization)
311
hg19
GRCh38
Lab
100
Kyle Gaulton, UCSD
7
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
biosample_type!
cell line
BIOSAMPLE
ASSAY
107 results
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Clear Filters
ChIP-seq
pCHi-C
total RNA-seq
ATAC-seq
DNAme array
primary cell
CD8-positive, alpha-beta T cell
33
1
2
monocyte
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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in vitro differentiated cells
embryonic stem cell
37
5
5
pancreatic PP cell
1
tissue
pancreas
1
thymus
1
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