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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
16
pCHi-C
3
total RNA-seq
1
DNAme array
Assay category
37
DNA binding
3
Transcription
1
DNA methylation
Target of assay
34
histone
34
histone modification
22
broad histone mark
12
narrow histone mark
3
control
Date released
134
May, 2022
102
May, 2020
88
February, 2023
57
May, 2021
56
September, 2020
46
February, 2021
17
August, 2017
13
July, 2019
12
October, 2019
8
January, 2021
8
June, 2019
3
November, 2017
3
October, 2022
1
August, 2021
1
March, 2020
1
May, 2019
1
November, 2018
1
September, 2018
Available data
35
bigWig
30
bed narrowPeak
2
bed bed3+
Organism
57
Homo sapiens
Biosample type
57
primary cell
48
in vitro differentiated cells
16
cell line
2
tissue
Organ
1
bone element
1
bone marrow
1
connective tissue
Project
41
AMP
16
T1D
Genome assembly (visualization)
184
hg19
GRCh38
Lab
51
Kyle Gaulton, UCSD
6
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
BIOSAMPLE
ASSAY
57 results
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ChIP-seq
pCHi-C
total RNA-seq
DNAme array
primary cell
CD8-positive, alpha-beta T cell
33
1
2
monocyte
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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