Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ChIP-seq
16
ATAC-seq
4
DNase-seq
1
pCHi-C
Assay category
Transcription
26
DNA binding
20
DNA accessibility
Target of assay
17
histone
17
histone modification
9
narrow histone mark
8
broad histone mark
5
transcription factor
4
control
2
RNA binding protein
Date released
84
February, 2021
26
June, 2019
21
May, 2021
21
November, 2019
18
October, 2019
13
March, 2020
9
February, 2023
6
November, 2020
4
December, 2017
4
May, 2020
3
August, 2021
3
May, 2019
2
July, 2019
Available data
30
bam
26
bed narrowPeak
26
bigWig
22
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
3
tagAlign
Organism
47
Homo sapiens
Biosample type
26
primary cell
17
cell line
3
in vitro differentiated cells
1
tissue
Organ
21
epithelium
17
pancreas
12
connective tissue
9
musculature of body
5
heart
4
kidney
1
limb
1
vasculature
Project
45
AMP
2
T1D
Genome assembly (visualization)
26
GRCh38
26
hg19
Lab
46
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
47
inconsistent ontology term
assay_slims!
Transcription
BIOSAMPLE
ASSAY
47 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
pCHi-C
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
4
1
epithelial cell of proximal tubule
3
1
naive B cel
1
+ See 1 more…
cell line
EndoC_BH1
1
16
in vitro differentiated cells
cardiomyocytes
3
tissue
muscle of leg
1
See all biosamples
Download