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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
16
ATAC-seq
4
ChIP-seq
2
Capture-C
1
STARR-seq
1
pCHi-C
Assay category
16
DNA accessibility
4
DNA binding
Target of assay
3
transcription factor
1
histone
1
histone modification
1
narrow histone mark
Date released
84
February, 2021
26
June, 2019
21
May, 2021
21
November, 2019
18
October, 2019
13
March, 2020
9
February, 2023
6
July, 2018
6
November, 2020
4
December, 2017
4
May, 2020
3
August, 2021
3
May, 2019
2
December, 2019
2
July, 2019
1
June, 2018
Available data
4
bam
4
bed narrowPeak
4
bigWig
3
tagAlign
Organism
24
Homo sapiens
Biosample type
20
cell line
3
in vitro differentiated cells
1
primary cell
Organ
19
epithelium
19
pancreas
Project
22
AMP
2
T1D
Genome assembly (visualization)
4
GRCh38
4
hg19
Lab
22
AMP-T2D consortium
1
Bing Ren, UCSD
1
Kyle Gaulton, UCSD
Audit category:
24
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ATAC-seq
ChIP-seq
Capture-C
STARR-seq
pCHi-C
cell line
EndoC_BH1
16
1
2
Synthesized DNA
1
in vitro differentiated cells
cardiomyocytes
3
primary cell
naive B cel
1
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