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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
200
ChIP-seq
131
total RNA-seq
34
ATAC-seq
1
DNAme array
Assay category
200
DNA binding
131
Transcription
34
DNA accessibility
1
DNA methylation
Target of assay
147
histone
147
histone modification
90
broad histone mark
57
narrow histone mark
32
control
21
transcription factor
10
RNA binding protein
Date released
670
February, 2021
411
August, 2017
406
November, 2017
319
August, 2021
314
October, 2019
296
May, 2020
246
May, 2021
218
June, 2019
168
July, 2018
120
May, 2019
108
July, 2019
106
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
66
May, 2022
61
November, 2019
57
March, 2020
49
April, 2018
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
5
March, 2019
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
264
bigWig
261
bam
145
bed narrowPeak
122
tsv
97
bigBed narrowPeak
6
tagAlign
2
bed bed3+
Organism
366
Homo sapiens
Biosample type
154
tissue
132
in vitro differentiated cells
60
primary cell
20
cell line
Organ
62
pancreas
50
blood vessel
50
vasculature
30
epithelium
28
brain
24
heart
7
limb
7
musculature of body
5
artery
5
kidney
2
embryo
1
connective tissue
Project
366
AMP
153
T1D
Genome assembly (visualization)
277
hg19
236
GRCh38
Lab
283
AMP-T2D consortium
83
Kyle Gaulton, UCSD
Audit category:
91
inconsistent ontology term
BIOSAMPLE
ASSAY
366 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
DNAme array
tissue
islet of Langerhans
36
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
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in vitro differentiated cells
cardiomyocytes
3
59
embryonic stem cell
37
5
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
+ See 10 more…
primary cell
CD8-positive, alpha-beta T cell
33
2
monocyte
1
1
13
1
kidney epithelial cell
5
naive thymus-derived CD4-positive, alpha-beta T cell
2
embryonic stem cell
1
+ See 1 more…
cell line
EndoC_BH1
4
16
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