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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
159
ChIP-seq
127
total RNA-seq
21
ATAC-seq
1
pCHi-C
Assay category
159
DNA binding
127
Transcription
21
DNA accessibility
Target of assay
111
histone
111
histone modification
66
broad histone mark
45
narrow histone mark
28
control
20
transcription factor
9
RNA binding protein
Date released
667
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
243
bam
225
bigWig
121
tsv
99
bed narrowPeak
93
bigBed narrowPeak
6
tagAlign
Organism
308
Homo sapiens
Biosample type
primary cell
155
tissue
132
in vitro differentiated cells
21
cell line
Organ
63
pancreas
50
blood vessel
50
vasculature
28
brain
26
epithelium
24
heart
7
limb
7
musculature of body
5
artery
2
embryo
1
connective tissue
1
thymus
Project
306
AMP
2
T1D
Genome assembly (visualization)
225
hg19
219
GRCh38
Lab
259
AMP-T2D consortium
49
Kyle Gaulton, UCSD
Audit category:
89
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
308 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
36
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 11 more…
in vitro differentiated cells
cardiomyocytes
3
59
embryonic stem cell
37
5
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
+ See 10 more…
cell line
EndoC_BH1
1
4
16
See all biosamples
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