Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
126
total RNA-seq
44
ChIP-seq
21
ATAC-seq
1
pCHi-C
Assay category
126
Transcription
44
DNA binding
21
DNA accessibility
Target of assay
22
histone
22
histone modification
16
transcription factor
12
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
397
November, 2017
310
August, 2021
276
October, 2019
227
August, 2017
215
February, 2021
194
May, 2020
192
May, 2021
162
June, 2019
120
July, 2018
115
May, 2019
103
February, 2023
94
December, 2017
86
November, 2018
80
April, 2019
67
July, 2019
66
May, 2022
61
March, 2020
60
November, 2019
51
October, 2018
47
September, 2023
39
February, 2018
35
December, 2018
30
January, 2019
23
February, 2020
22
October, 2017
19
April, 2020
14
May, 2023
10
November, 2020
8
January, 2021
7
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2022
1
October, 2022
Available data
131
bigWig
127
bam
120
tsv
6
bed narrowPeak
6
tagAlign
Organism
192
Homo sapiens
Biosample type
primary cell
131
in vitro differentiated cells
40
tissue
21
cell line
Organ
61
pancreas
26
epithelium
3
heart
2
embryo
connective tissue
1
thymus
Project
190
AMP
2
T1D
Genome assembly (visualization)
131
hg19
126
GRCh38
Lab
143
AMP-T2D consortium
49
Kyle Gaulton, UCSD
Audit category:
89
inconsistent ontology term
biosample_type!
primary cell
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
192 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
37
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiomyocytes (cardiac muscle cell)
1
+ See 9 more…
tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
pancreas
1
thymus
1
cell line
EndoC_BH1
4
1
16
See all biosamples
Download