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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
55
total RNA-seq
16
pCHi-C
13
ATAC-seq
3
ChIP-seq
1
DNAme array
Assay category
55
Transcription
13
DNA accessibility
3
DNA binding
1
DNA methylation
Target of assay
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
147
May, 2020
134
May, 2022
88
February, 2023
88
May, 2021
59
September, 2020
48
February, 2021
48
July, 2018
43
April, 2018
41
September, 2018
36
June, 2019
31
July, 2019
21
August, 2017
13
October, 2019
8
January, 2021
7
August, 2020
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
June, 2018
3
October, 2022
2
May, 2019
2
October, 2018
1
August, 2021
1
March, 2020
1
March, 2023
1
November, 2018
Available data
65
bam
57
bigWig
52
tsv
13
bed narrowPeak
2
bed bed3+
Organism
88
Homo sapiens
Biosample type
111
in vitro differentiated cells
88
primary cell
40
tissue
20
cell line
Organ
1
bone element
1
bone marrow
1
connective tissue
Project
67
T1D
21
AMP
Genome assembly (visualization)
70
hg19
65
GRCh38
Lab
72
Kyle Gaulton, UCSD
16
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
target.investigated_as!
histone
BIOSAMPLE
ASSAY
88 results
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total RNA-seq
pCHi-C
ATAC-seq
ChIP-seq
DNAme array
primary cell
monocyte
52
1
13
1
CD8-positive, alpha-beta T cell
2
1
3
CD4-positive, alpha-beta T cell
2
B cell
1
activated CD4-positive, alpha-beta T cell
1
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