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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
total RNA-seq
121
ChIP-seq
25
ATAC-seq
16
pCHi-C
1
DNAme array
Assay category
131
Transcription
121
DNA binding
25
DNA accessibility
1
DNA methylation
Target of assay
118
histone
118
histone modification
66
broad histone mark
52
narrow histone mark
3
control
Date released
206
May, 2021
147
May, 2020
134
May, 2022
88
February, 2023
73
September, 2018
59
August, 2017
59
September, 2020
55
June, 2019
48
February, 2021
48
July, 2018
43
April, 2018
34
October, 2019
31
July, 2019
9
November, 2017
8
January, 2021
7
August, 2020
6
November, 2020
5
December, 2019
5
May, 2019
5
September, 2017
4
August, 2021
3
August, 2018
3
June, 2018
3
October, 2022
2
October, 2018
1
March, 2020
1
March, 2023
1
November, 2018
Available data
171
bigWig
149
bam
127
bed narrowPeak
84
tagAlign
76
fastq
64
tsv
2
bed bed3+
Organism
294
Homo sapiens
Biosample type
294
primary cell
148
in vitro differentiated cells
135
tissue
27
cell line
Organ
37
epithelium
37
pancreas
1
bone element
1
bone marrow
1
connective tissue
Project
151
T1D
76
HPAP
67
AMP
Genome assembly (visualization)
184
hg19
149
GRCh38
Lab
186
Kyle Gaulton, UCSD
76
Klaus Kaestner, Upenn
32
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
BIOSAMPLE
ASSAY
294 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
52
85
13
1
1
exocrine cell
39
CD8-positive, alpha-beta T cell
2
33
1
pancreatic alpha cell
27
pancreatic beta cell
10
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
oligodendrocyte
3
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
activated CD4-positive, alpha-beta T cell
1
adult endothelial progenitor cell
1
alternatively activated macrophage
1
embryonic stem cell
1
erythroblast
1
inflammatory macrophage
1
macrophage
1
megakaryocyte
1
naive B cel
1
naive thymus-derived CD8-positive, alpha-beta T cell
1
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