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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
17
pCHi-C
16
ATAC-seq
7
total RNA-seq
1
DNAme array
Assay category
41
DNA binding
16
DNA accessibility
7
Transcription
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
5
RNA binding protein
5
control
Date released
254
August, 2021
202
February, 2023
156
May, 2022
143
February, 2021
109
August, 2017
82
May, 2021
60
October, 2019
58
May, 2020
56
September, 2020
47
September, 2023
44
March, 2020
25
February, 2020
22
July, 2019
19
April, 2020
16
January, 2021
15
May, 2023
13
November, 2017
10
November, 2020
7
October, 2017
5
December, 2019
5
March, 2023
4
July, 2018
4
March, 2019
4
October, 2022
2
November, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
bigWig
bam
173
tsv
133
bed narrowPeak
90
tagAlign
2
bed bed3+
Organism
82
Homo sapiens
Biosample type
42
in vitro differentiated cells
22
primary cell
16
cell line
2
tissue
Organ
17
pancreas
16
epithelium
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
65
AMP
17
T1D
Lab
60
Kyle Gaulton, UCSD
22
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
files.file_type!
bigWig
bam
BIOSAMPLE
ASSAY
82 results
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Clear Filters
ChIP-seq
pCHi-C
ATAC-seq
total RNA-seq
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
primary cell
monocyte
1
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
B cell
1
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cell line
EndoC_BH1
16
tissue
pancreas
1
thymus
1
See all biosamples
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